Seawater, when supplemented to a growth medium, appears to stimulate auto-flocculation of a certain microalgae species like Scenedesmus obliquus and thus renders its harvesting easy. To make use of this unique response for the purpose of biomass harvesting, S. obliquus was grown in a seawater-added medium and then collected in electrochemically-mediated ways. Significantly higher harvesting efficiency and energy saving were observed with electroflotation (EF) than with electro-coagulation-flotation (ECF) and the standard BG11 medium. An optimal EF condition, the highest recovery rate with least energy use, was found with a supply of 0.5 A. Seawater amendment was most beneficial in a level of 10%. All this clearly showed that applying EF to cells cultivated in the seawater-supplemented medium is a promising harvesting means that enables one to obtain algae biomass without interfering with the downstream process of biodiesel production.